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Lecture Slides




10kTrees Website

Phylogenetic Targeting Website


Problem Set

Data file:



For those wishing to skip the "download trees" portion of the exercise, here are 10 trees for "tree viewing":


Supplemental Readings

Chapter 1 from my book (skim, not directly related to the lecture)

about controlling for phylogenetic uncertainty

describing the 10kTrees website

Chapter 13 from my book (summarizes phylogenetic targeting):

Tree-thinking challenge with answers

Tree-thinking Science article.


Additional Readings From Others in the Class

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